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Supplementary methods, references and figures from Solution structure of CXCL13 and heparan sulfate binding show that GAG binding site and cellular signalling rely on distinct domains

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posted on 2017-10-10, 13:07 authored by Yoan R. Monneau, Lingjie Luo, Nehru Viji Sankaranarayanan, Balaji Nagarajan, Romain R. Vivès, Françoise Baleux, Umesh R. Desai, Fernando Arenzana-Seidedos, Hugues Lortat-Jacob
The supplement includes the experimental procedures for the preparation of CXCL13 and biotinilated HS, the NMR, the molecular dynamics and the binding studies. It comprises 12 supplementary figures and a table supporting the NMR-based structural characterization of CXCL13 monomer and dimer, the kinetic analysis of the binding of wt- and mutant- CXCL13 to HS, the conformational space exploration of CXCL13-HS complex, the mass-spectrometry based analysis of the fluorescently tagged CXCL13, the CXCL13 binding to HS+ and HS- cells, the analysis of the CXCR5 expression of splenocytes and transfected CHO cells and a structural comparison of various Chemokine's 40s loop.

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