Figure S4. IEGs are enriched in genes classified as peaks from Conserved temporal ordering of promoter activation implicates common mechanisms governing the immediate early response across cell types and stimuli

Vacca, Annalaura; Itoh, Masayoshi; Kawaji, Hideya; Arner, Erik; Lassmann, Timo; O. Daub, Carsten; Carninci, Piero; R. R. Forrest, Alistair; Hayashizaki, Yoshihide; FANTOM Consortium, the; Aitken, Stuart; A. Semple, Colin

doi:10.6084/m9.figshare.6819749.v1

rsob180011_si_006.pdf (32.2 kB)

Figure S4. IEGs are enriched in genes classified as peaks from Conserved temporal ordering of promoter activation implicates common mechanisms governing the immediate early response across cell types and stimuli

journal contribution

posted on 2018-07-16, 11:13 authored by Annalaura Vacca, Masayoshi Itoh, Hideya Kawaji, Erik Arner, Timo Lassmann, Carsten O. Daub, Piero Carninci, Alistair R. R. Forrest, Yoshihide Hayashizaki, the FANTOM Consortium, Stuart Aitken, Colin A. Semple

(A) Stacked bars show the numbers of known IEGs (light blue) and TFs (yellow) recovered for the four models of interest (linear, dip, decay and peak) in each time series dataset. Significant enrichment for known IEGs is denoted by an asterisk. Pie charts show the percentage of IEGs contained in the robust set (B) and in the group of genes peaking exclusively in one dataset (C), respectively.